.. AquaMine documentation master file, created by sphinx-quickstart on Wed Jan 5 10:29:40 2022. You can adapt this file completely to your liking, but it should at least contain the root `toctree` directive. AquaMine v1.3 Documentation ================================================== **AquaMine** is a data mining resource that integrates genomic data of importance to U.S. aquaculture. It combines data generated by the aquaculture research community with data from external public databases. Many customized bioinformatics tools are available that researchers with or without bioinformatic programming skills can use to create their own crafted datasets for use in their research projects. AquaMine is powered by `InterMine `_, an open-source data warehousing system that provides access to a wide variety of datasets. .. image:: images/AquaMine-banner.jpg :alt: AquaMine main menu .. Main site: https://aquamine.rnet.missouri.edu/aquamine/begin.do Link to the datasets used in AquaMine can be found here: https://aquamine.rnet.missouri.edu/aquamine/dataCategories.do `AquaMine.org `_ is based upon work supported by Agriculture and Food Research Initiative Competitive grant no. 2021-67021-34254 from the USDA National Institute of Food and Agriculture. AquaMine is developed and hosted at the `University of Missouri `_. .. toctree:: :caption: Table of Contents :maxdepth: 4 :hidden: overview navigation_and_searching reports genomic_region_search lists mymine api data_sources how_to_cite For more generic examples on how to use InterMine, click `here `_. These are tutorials created by FlyMine that showcase the different features of InterMine.